Index A | B | C | D | E | F | G | H | I | K | L | M | N | O | P | Q | R | S | T | U | V | W A acquisition_state (m3resp.RecordingSession attribute) add() (m3resp.IntervalDataCollection method) (m3resp.ParameterResultCollection method) (m3resp.PixelMaskCollection method) (m3resp.QualityReport method) (m3resp.SignalCollection method) add_breath() (m3resp.DataModelStore method) add_case() (m3resp.DataModelStore method) add_clinical_event() (m3resp.DataModelStore method) add_data_file() (m3resp.DataModelStore method) add_derived_feature() (m3resp.DataModelStore method) add_device() (m3resp.DataModelStore method) add_eit_configuration() (m3resp.DataModelStore method) add_emg_channel() (m3resp.DataModelStore method) add_events() (m3resp.M3Session method) add_processing_run() (m3resp.DataModelStore method) add_quality_annotation() (m3resp.DataModelStore method) add_session() (m3resp.DataModelStore method) add_signal_stream() (m3resp.DataModelStore method) add_ventilator_setting() (m3resp.DataModelStore method) align_modalities() (m3resp.M3Session method) annotation_source (m3resp.QualityAnnotation attribute) annotations_for_target() (m3resp.DataModelStore method) annotator_ref (m3resp.QualityAnnotation attribute) array (m3resp.synthetic.SyntheticRecord attribute) artifact_type (m3resp.QualityAnnotation attribute) as_dict() (m3resp.workflows.CompiledWorkflow method) (m3resp.workflows.ValidationReport method) available_presets() (in module m3resp) available_steps() (in module m3resp) B base_impedance_au (m3resp.synthetic.EITGeneratorConfig attribute) baseline basename (m3resp.synthetic.SyntheticGeneratorConfig attribute) body_position (m3resp.RecordingSession attribute) breath breath_id (m3resp.ParameterResult attribute) (m3resp.QualityFlag attribute) breath_ids (m3resp.ParameterResult attribute) (m3resp.QualityAnnotation attribute) (m3resp.QualityFlag attribute) BreathEvent (class in m3resp) breaths (m3resp.LinkedBreath attribute) C calibration_status (m3resp.Device attribute) cardiac_amplitude_au (m3resp.synthetic.EITGeneratorConfig attribute) Case (class in m3resp) case_id (m3resp.Case attribute) (m3resp.RecordingSession attribute) category (m3resp.EventData attribute) (m3resp.IntervalData attribute) (m3resp.ParameterResult attribute) (m3resp.PixelMap attribute) (m3resp.QualityFlag attribute) (m3resp.Signal attribute) channel (m3resp.ParameterResult attribute) (m3resp.Signal attribute) channel_amplitudes_uv (m3resp.synthetic.EMGGeneratorConfig attribute) checksum_sha256 (m3resp.DataFile attribute) ClinicalEvent (class in m3resp) clock_drift_ppm (m3resp.SignalStream attribute) code_commit_hash (m3resp.ProcessingRun attribute) coerce_breath_event() (in module m3resp) coerce_breath_events() (in module m3resp) coerce_event() (in module m3resp) coerce_events() (in module m3resp) coerce_interval() (in module m3resp) coerce_intervals() (in module m3resp) collect_diagnostics() (in module m3resp.workflows) compile_workflow() (in module m3resp.workflows) (m3resp.workflows.WorkflowService method) compiled_workflow (m3resp.WorkflowResult attribute) CompiledWorkflow (class in m3resp.workflows) compute_breath_timing_parameters() (m3resp.M3Session method) compute_offsets_from_timestamps() (in module m3resp) confidence (m3resp.ClinicalEvent attribute) (m3resp.Event attribute) (m3resp.Interval attribute) (m3resp.LinkedBreath attribute) context (m3resp.WorkflowResult attribute) created_at (m3resp.Case attribute) (m3resp.DataFile attribute) D DataFile (class in m3resp) DataModelRecorder (class in m3resp) DataModelStore (class in m3resp) derived_from (m3resp.Signal attribute) DerivedFeature (class in m3resp) describe_capability() (m3resp.workflows.WorkflowService method) description (m3resp.ClinicalEvent attribute) (m3resp.workflows.WorkflowSpec attribute) detect_eit_breaths() (m3resp.M3Session method) detect_emg_breaths() (m3resp.M3Session method) detect_ventilator_breaths() (m3resp.M3Session method) Device (class in m3resp) device_id (m3resp.Device attribute) (m3resp.SignalStream attribute) device_local_start_time (m3resp.SignalStream attribute) device_type (m3resp.Device attribute) diagnostics (m3resp.WorkflowResult attribute) drift (m3resp.synthetic.EITGeneratorConfig attribute) drift_amplitude_uv (m3resp.synthetic.EMGGeneratorConfig attribute) driving_pressure_cm_h2o (m3resp.synthetic.VentilatorGeneratorConfig attribute) duration (m3resp.Interval property) (m3resp.TimeSeries property) duration_seconds (m3resp.synthetic.SyntheticGeneratorConfig attribute) (m3resp.WorkflowResult attribute) E ECG ecg_acceleration (m3resp.synthetic.EMGGeneratorConfig attribute) EIT eit (m3resp.synthetic.SyntheticDataset attribute) (m3resp.synthetic.SyntheticGeneratorConfig attribute) eit_waveform (m3resp.synthetic.SyntheticGeneratorConfig attribute) EITGeneratorConfig (class in m3resp.synthetic) EITPreset (class in m3resp) EMG emg (m3resp.synthetic.SyntheticDataset attribute) (m3resp.synthetic.SyntheticGeneratorConfig attribute) emg_moving_baseline() (m3resp.M3Session method) emg_slopesum_baseline() (m3resp.M3Session method) EMGGeneratorConfig (class in m3resp.synthetic) EMGPreset (class in m3resp) end_index (m3resp.Interval attribute) end_time (m3resp.Interval attribute) (m3resp.ParameterResult attribute) (m3resp.QualityFlag attribute) envelope error (m3resp.ProcessingRun attribute) event Event (class in m3resp) event_end_time (m3resp.ClinicalEvent attribute) event_id (m3resp.ClinicalEvent attribute) (m3resp.ParameterResult attribute) event_source (m3resp.ClinicalEvent attribute) event_start_time (m3resp.ClinicalEvent attribute) event_to_dict() (in module m3resp) event_type (m3resp.ClinicalEvent attribute) EventData (class in m3resp) events (m3resp.EventData attribute) (m3resp.synthetic.SyntheticGeneratorConfig attribute) execution (m3resp.workflows.WorkflowSpec attribute) execution_context (m3resp.WorkflowResult attribute) experiment (m3resp.workflows.WorkflowSpec attribute) export (m3resp.synthetic.SyntheticGeneratorConfig attribute) export_session_summary() (in module m3resp.export) export_store() (in module m3resp) export_summary() (m3resp.M3Session method) external_case_ref (m3resp.Case attribute) extremum extremum_index (m3resp.BreathEvent attribute) extremum_time (m3resp.BreathEvent attribute) F failed() (m3resp.QualityReport method) feature_id (m3resp.DerivedFeature attribute) feature_name (m3resp.DerivedFeature attribute) features_for_run() (m3resp.DataModelStore method) file_format (m3resp.DataFile attribute) file_id (m3resp.DataFile attribute) file_path (m3resp.DataFile attribute) file_role (m3resp.DataFile attribute) file_size_bytes (m3resp.DataFile attribute) files_for_signal() (m3resp.DataModelStore method) finished_at (m3resp.WorkflowResult attribute) for_category() (m3resp.ParameterResultCollection method) (m3resp.QualityReport method) (m3resp.SignalCollection method) for_modality() (m3resp.IntervalDataCollection method) (m3resp.ParameterResultCollection method) (m3resp.QualityReport method) (m3resp.SignalCollection method) for_name() (m3resp.IntervalDataCollection method) (m3resp.ParameterResultCollection method) (m3resp.PixelMaskCollection method) for_signal() (m3resp.QualityReport method) format_name (m3resp.synthetic.EITGeneratorConfig attribute) G generate_eit (m3resp.synthetic.SyntheticGeneratorConfig attribute) generate_emg (m3resp.synthetic.SyntheticGeneratorConfig attribute) generate_realistic_eit_signal() (in module m3resp.synthetic) generate_synthetic_dataset() (in module m3resp.synthetic) generate_ventilator (m3resp.synthetic.SyntheticGeneratorConfig attribute) get_events() (m3resp.M3Session method) get_preset() (in module m3resp) get_ventilator() (m3resp.M3Session method) H has_quality_annotation_target() (m3resp.DataModelStore method) heart_rate_bpm (m3resp.synthetic.EITGeneratorConfig attribute) (m3resp.synthetic.EMGGeneratorConfig attribute) I id (m3resp.Event attribute) (m3resp.Interval attribute) (m3resp.workflows.StepSpec attribute) ie_ratio (m3resp.synthetic.RespiratoryPatternConfig attribute) included_pixel_count (m3resp.PixelMask property) input_file_ids (m3resp.ProcessingRun attribute) input_keys (m3resp.ProcessingStep attribute) inputs (m3resp.workflows.StepSpec attribute) (m3resp.workflows.WorkflowSpec attribute) interpolate_to_time() (in module m3resp) interval Interval (class in m3resp) IntervalData (class in m3resp) IntervalDataCollection (class in m3resp) intervals (m3resp.IntervalData attribute) is_legacy (m3resp.workflows.WorkflowSpec property) is_scalar (m3resp.ParameterResult property) is_valid (m3resp.workflows.ValidationReport property) items (m3resp.IntervalDataCollection attribute) (m3resp.ParameterResultCollection attribute) (m3resp.PixelMaskCollection attribute) (m3resp.QualityReport attribute) (m3resp.SignalCollection attribute) K keep_zeros (m3resp.PixelMask attribute) kind (m3resp.ProcessingRun attribute) L label (m3resp.Event attribute) (m3resp.Interval attribute) labels (m3resp.synthetic.SyntheticRecord attribute) link_breaths() (m3resp.M3Session method) link_breaths_by_time() (in module m3resp) linked breath LinkedBreath (class in m3resp) list_capabilities() (m3resp.workflows.WorkflowService method) load_eit() (in module m3resp.io) (m3resp.M3Session method) load_emg() (in module m3resp.io) (m3resp.M3Session method) load_spec() (in module m3resp) load_synthetic_generator_config() (in module m3resp.synthetic) load_ventilator() (m3resp.M3Session method) lung_template (m3resp.synthetic.SyntheticGeneratorConfig attribute) M M3Session (class in m3resp) manifest_path (m3resp.WorkflowResult attribute) manufacturer (m3resp.Device attribute) medibus (m3resp.synthetic.SyntheticGeneratorConfig attribute) message (m3resp.QualityFlag attribute) metadata (m3resp.Event attribute) (m3resp.EventData attribute) (m3resp.Interval attribute) (m3resp.IntervalData attribute) (m3resp.LinkedBreath attribute) (m3resp.ParameterResult attribute) (m3resp.PixelMap attribute) (m3resp.PixelMask attribute) (m3resp.QualityFlag attribute) (m3resp.synthetic.SyntheticRecord attribute) (m3resp.TimeSeries attribute) (m3resp.workflows.WorkflowSpec attribute) method (m3resp.EventData attribute) (m3resp.IntervalData attribute) (m3resp.ParameterResult attribute) (m3resp.PixelMap attribute) (m3resp.PixelMask attribute) (m3resp.Signal attribute) metric_type (m3resp.ParameterResult attribute) modalities (m3resp.LinkedBreath property) modality (m3resp.Event attribute) (m3resp.EventData attribute) (m3resp.Interval attribute) (m3resp.IntervalData attribute) (m3resp.ParameterResult attribute) (m3resp.PixelMap attribute) (m3resp.PixelMask attribute) (m3resp.QualityFlag attribute) (m3resp.Signal attribute) model (m3resp.Device attribute) model_config (m3resp.Case attribute) (m3resp.ClinicalEvent attribute) (m3resp.DataFile attribute) (m3resp.DerivedFeature attribute) (m3resp.Device attribute) (m3resp.ProcessingRun attribute) (m3resp.QualityAnnotation attribute) (m3resp.RecordingSession attribute) (m3resp.SignalStream attribute) MultimodalPreset (class in m3resp) muscle_pressure_amplitude_cm_h2o (m3resp.synthetic.VentilatorGeneratorConfig attribute) N n_samples (m3resp.TimeSeries property) name (m3resp.BreathEvent attribute) (m3resp.EITPreset attribute) (m3resp.EMGPreset attribute) (m3resp.Event attribute) (m3resp.EventData attribute) (m3resp.Interval attribute) (m3resp.IntervalData attribute) (m3resp.MultimodalPreset attribute) (m3resp.ParameterResult attribute) (m3resp.PixelMap attribute) (m3resp.PixelMask attribute) (m3resp.Preset attribute) (m3resp.ProcessingRun attribute) (m3resp.ProcessingStep attribute) (m3resp.QualityFlag attribute) (m3resp.TimeSeries attribute) (m3resp.WorkflowResult attribute) (m3resp.workflows.CompiledWorkflow attribute) (m3resp.workflows.WorkflowSpec attribute) noise_amplitude_uv (m3resp.synthetic.EMGGeneratorConfig attribute) noise_std_au (m3resp.synthetic.EITGeneratorConfig attribute) notes (m3resp.RecordingSession attribute) O occlusion_times_seconds (m3resp.synthetic.RespiratoryPatternConfig attribute) offset operator_ref (m3resp.ProcessingRun attribute) (m3resp.RecordingSession attribute) optional_package_versions (m3resp.ProcessingStep attribute) output_dir (m3resp.synthetic.SyntheticGeneratorConfig attribute) output_keys (m3resp.ProcessingStep attribute) outputs (m3resp.WorkflowResult attribute) (m3resp.workflows.StepSpec attribute) (m3resp.workflows.WorkflowSpec attribute) P parameter parameter_file_ids (m3resp.ProcessingRun attribute) ParameterResult (class in m3resp) ParameterResultCollection (class in m3resp) parameters (m3resp.ProcessingRun attribute) (m3resp.ProcessingStep attribute) params (m3resp.workflows.StepSpec attribute) passed (m3resp.QualityFlag attribute) paths (m3resp.synthetic.SyntheticRecord attribute) pixel map pixel_breath_events() (in module m3resp) PixelMap (class in m3resp) PixelMask (class in m3resp) PixelMaskCollection (class in m3resp) plot_eit_processing_summary() (in module m3resp.visualization) plot_session_overview() (in module m3resp.visualization) plot_synchronization_comparison() (in module m3resp.visualization) postprocess_emg() (m3resp.M3Session method) preprocess_eit() (m3resp.M3Session method) preprocess_emg() (m3resp.M3Session method) preprocess_ventilator() (m3resp.M3Session method) preset Preset (class in m3resp) primary_ventilator_name() (m3resp.M3Session method) processing_run_id (m3resp.DerivedFeature attribute) (m3resp.ProcessingRun attribute) (m3resp.WorkflowResult attribute) processing_state (m3resp.Signal attribute) ProcessingHistory (class in m3resp) ProcessingRun (class in m3resp) ProcessingStep (class in m3resp) provenance (m3resp.synthetic.SyntheticDataset attribute) Q quality flag quality_annotation_id (m3resp.QualityAnnotation attribute) quality_flag (m3resp.DerivedFeature attribute) quality_label (m3resp.QualityAnnotation attribute) QualityAnnotation (class in m3resp) QualityFlag (class in m3resp) QualityReport (class in m3resp) R R peak readiness (m3resp.workflows.ValidationReport attribute) record() (m3resp.ProcessingHistory method) record_interval_data() (m3resp.DataModelRecorder method) record_parameter() (m3resp.DataModelRecorder method) record_parameter_file() (m3resp.DataModelRecorder method) record_pixel_grid() (m3resp.DataModelRecorder method) record_processing_step() (m3resp.DataModelRecorder method) record_provenance() (m3resp.DataModelRecorder method) record_quality_flag() (m3resp.DataModelRecorder method) record_signal() (m3resp.DataModelRecorder method) record_synchronization() (m3resp.DataModelRecorder method) record_workflow_result() (m3resp.DataModelRecorder method) recording RecordingSession (class in m3resp) region (m3resp.ParameterResult attribute) register_preset() (in module m3resp) register_step() (in module m3resp) resolved_output_dir (m3resp.WorkflowResult attribute) respiratory (m3resp.synthetic.SyntheticGeneratorConfig attribute) respiratory_rate_bpm (m3resp.synthetic.RespiratoryPatternConfig attribute) respiratory_rate_variation_bpm (m3resp.synthetic.RespiratoryPatternConfig attribute) RespiratoryPatternConfig (class in m3resp.synthetic) result root (m3resp.workflows.WorkflowSpec attribute) run() (m3resp.EITPreset method) (m3resp.EMGPreset method) (m3resp.MultimodalPreset method) (m3resp.Preset method) run_id (m3resp.WorkflowResult attribute) run_preset() (m3resp.M3Session method) run_spec() (in module m3resp) run_time (m3resp.ProcessingRun attribute) run_workflow() (in module m3resp) (m3resp.workflows.WorkflowService method) runs_for_file() (m3resp.DataModelStore method) S sample_count (m3resp.SignalStream attribute) sample_frequency (m3resp.Event attribute) (m3resp.Interval attribute) (m3resp.synthetic.SyntheticRecord attribute) (m3resp.TimeSeries attribute) sample_frequency_hz (m3resp.synthetic.EITGeneratorConfig attribute) (m3resp.synthetic.EMGGeneratorConfig attribute) (m3resp.synthetic.VentilatorGeneratorConfig attribute) sample_index (m3resp.Event attribute) sampling rate sampling_frequency_hz (m3resp.SignalStream attribute) schema_version (m3resp.workflows.CompiledWorkflow attribute) (m3resp.workflows.WorkflowSpec attribute) seed (m3resp.synthetic.SyntheticGeneratorConfig attribute) serial_number_hash (m3resp.Device attribute) session (m3resp.WorkflowResult property) session_end_time (m3resp.RecordingSession attribute) session_id (m3resp.ClinicalEvent attribute) (m3resp.DataFile attribute) (m3resp.RecordingSession attribute) (m3resp.SignalStream attribute) session_start_time (m3resp.RecordingSession attribute) sessions_for_case() (m3resp.DataModelStore method) setting severity (m3resp.QualityFlag attribute) shape (m3resp.PixelMap property) (m3resp.PixelMask property) signal Signal (class in m3resp) signal_id (m3resp.DataFile attribute) (m3resp.SignalStream attribute) signal_name (m3resp.Event attribute) (m3resp.Interval attribute) (m3resp.QualityFlag attribute) signal_type (m3resp.SignalStream attribute) SignalCollection (class in m3resp) SignalStream (class in m3resp) skip_synchronization() (m3resp.M3Session method) slice_eit() (m3resp.M3Session method) slice_emg() (m3resp.M3Session method) slice_ventilator() (m3resp.M3Session method) software (m3resp.ProcessingStep attribute) software_version (m3resp.Device attribute) source (m3resp.Interval attribute) (m3resp.Signal attribute) source_signal_ids (m3resp.DerivedFeature attribute) start time start_index (m3resp.Interval attribute) start_time (m3resp.Interval attribute) (m3resp.ParameterResult attribute) (m3resp.QualityFlag attribute) (m3resp.SignalStream attribute) started_at (m3resp.WorkflowResult attribute) status (m3resp.ProcessingRun attribute) (m3resp.ProcessingStep attribute) (m3resp.WorkflowResult attribute) step step_records (m3resp.WorkflowResult attribute) steps (m3resp.ProcessingHistory attribute) (m3resp.workflows.CompiledWorkflow attribute) (m3resp.workflows.WorkflowSpec attribute) StepSpec (class in m3resp.workflows) streams_for_session() (m3resp.DataModelStore method) structural (m3resp.workflows.ValidationReport attribute) study_ref (m3resp.Case attribute) suppress_all_nan_warning (m3resp.PixelMask attribute) suppress_value_range_error (m3resp.PixelMask attribute) suppress_zero_conversion_warning (m3resp.PixelMask attribute) sync_method (m3resp.SignalStream attribute) sync_quality_label (m3resp.SignalStream attribute) sync_reference_stream (m3resp.SignalStream attribute) sync_uncertainty_ms (m3resp.SignalStream attribute) synchronization synchronize_multimodal_breaths() (m3resp.M3Session method) synchronize_raw_modalities() (m3resp.M3Session method) SyntheticDataset (class in m3resp.synthetic) SyntheticGeneratorConfig (class in m3resp.synthetic) SyntheticRecord (class in m3resp.synthetic) T target_id (m3resp.QualityAnnotation attribute) target_type (m3resp.QualityAnnotation attribute) tau_mus_down_seconds (m3resp.synthetic.EMGGeneratorConfig attribute) tau_mus_up_seconds (m3resp.synthetic.EMGGeneratorConfig attribute) threshold (m3resp.QualityFlag attribute) tidal_amplitude_au (m3resp.synthetic.EITGeneratorConfig attribute) time (m3resp.Event attribute) (m3resp.synthetic.SyntheticRecord attribute) (m3resp.TimeSeries attribute) time window time_base (m3resp.SignalStream attribute) time_offset_ms (m3resp.SignalStream attribute) time_tolerance (m3resp.LinkedBreath attribute) time_window_end (m3resp.DerivedFeature attribute) (m3resp.QualityAnnotation attribute) time_window_start (m3resp.DerivedFeature attribute) (m3resp.QualityAnnotation attribute) time_zone (m3resp.SignalStream attribute) TimeSeries (class in m3resp) timestamp (m3resp.ProcessingStep attribute) timestamp_output_dir (m3resp.synthetic.SyntheticGeneratorConfig attribute) timing_drift (m3resp.synthetic.EITGeneratorConfig attribute) (m3resp.synthetic.EMGGeneratorConfig attribute) (m3resp.synthetic.VentilatorGeneratorConfig attribute) to_dict() (m3resp.ParameterResult method) (m3resp.PixelMap method) (m3resp.PixelMask method) (m3resp.ProcessingStep method) (m3resp.QualityFlag method) to_list() (m3resp.ProcessingHistory method) to_manifest_row() (m3resp.Signal method) (m3resp.TimeSeries method) to_manifest_rows() (m3resp.SignalCollection method) to_rows() (m3resp.ParameterResultCollection method) (m3resp.QualityReport method) U unit (m3resp.DerivedFeature attribute) (m3resp.EventData attribute) (m3resp.IntervalData attribute) (m3resp.ParameterResult attribute) (m3resp.PixelMap attribute) (m3resp.SignalStream attribute) (m3resp.TimeSeries attribute) units (m3resp.synthetic.SyntheticRecord attribute) uses (m3resp.workflows.StepSpec attribute) V validate_spec() (in module m3resp.workflows) validate_store() (in module m3resp) validate_workflow() (in module m3resp.workflows) (m3resp.workflows.WorkflowService method) ValidationReport (class in m3resp.workflows) value (m3resp.DerivedFeature attribute) (m3resp.ParameterResult attribute) (m3resp.QualityFlag attribute) value() (m3resp.WorkflowResult method) values (m3resp.EventData attribute) (m3resp.IntervalData attribute) (m3resp.PixelMap attribute) (m3resp.PixelMask attribute) (m3resp.TimeSeries attribute) ventilator (m3resp.synthetic.SyntheticDataset attribute) (m3resp.synthetic.SyntheticGeneratorConfig attribute) VentilatorGeneratorConfig (class in m3resp.synthetic) version (m3resp.ProcessingRun attribute) (m3resp.ProcessingStep attribute) W warnings (m3resp.WorkflowResult attribute) workflow WorkflowResult (class in m3resp) WorkflowService (class in m3resp.workflows) WorkflowSpec (class in m3resp.workflows) write_native_outputs (m3resp.synthetic.SyntheticGeneratorConfig attribute)